PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_01372
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 176aa    MW: 19850.3 Da    PI: 10.2133
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_01372genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183585155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a + ++g
  PEQU_01372 35 PKYRGVRMRN-WGKWVSEIREPKK---KSRIWLGTFPTAEMAARAHDVASLTIKG 85
                79*****998.**********854...6*******************99887766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.21E-323595No hitNo description
PfamPF008472.1E-123584IPR001471AP2/ERF domain
SMARTSM003801.4E-363699IPR001471AP2/ERF domain
PROSITE profilePS5103223.2483693IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-323694IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-213694IPR016177DNA-binding domain
PRINTSPR003675.3E-113748IPR001471AP2/ERF domain
PRINTSPR003675.3E-115975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MDQSLSHNSS STSSTPNPED SFPHTRKRNR DLKPPKYRGV RMRNWGKWVS EIREPKKKSR  60
IWLGTFPTAE MAARAHDVAS LTIKGQSAQL NFPHLAAEFP RPATTSPKDI QAAAAKAAAF  120
TYRQPPLPKQ STPPATPPSS SDEDAAFLDL PDIIDFRAGW VSLWTDELNF RFLWEY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-163393263ATERF1
3gcc_A6e-163393263ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009400894.11e-55PREDICTED: ethylene-responsive transcription factor ERF039-like
SwissprotQ8LBQ71e-45ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A0K9P9975e-48A0A0K9P997_Z
TrEMBLF6GV811e-48F6GV81_VITVI; Putative uncharacterized protein
STRINGVIT_15s0021g02110.t014e-48(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.19e-44ERF family protein